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PaVE: the papillomavirus episteme

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You can observe cellular factors from the ENCODE database binding to the HPV18 integration site in HeLa cells in Epigenetics.

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You can create phylogenetic trees from proteins selected in a database search.

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The Image Viewer contains many images of papillomavirus infection.

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Tables of Animal, Reference HPV, and non-reference HPV types are listed in Reference Genomes.

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The new MAFFT-based Multiple Sequence Alignment tool has many different display options.

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The L1 taxonomy tool can tell you whether you might have isolated a new PV type.

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You can generate genome maps for presentation and publication using the Genome Browser.

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Too many unrelated hits with NCBI BLAST? Try PaVE BLAST!

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PaVE contains transcript maps for many papillomaviruses.

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PaVE has options to include "Non-reference" HPV genome sequences. These are HPV types that have not been officially named by the HPV reference Center.

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A Special Issue: the Papillomavirus Episteme contains articles written by experts to provide information about papillomavirus evolution, genomes, proteins and more.

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You can visualize papillomavirus protein structures in the Protein Structure Viewer and align homologous sequences to assess the position of each amino acid residue.

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Check out PaVE Resources for information about Conferences, Recent Articles in PubMed, and other External Resources.

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Look inside the HPV capsid with the 3D Viewer

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